Nic M Vega, William B Ludington
Current Opinion in Microbiology
|
2021 |
A gut commensal niche regulates stable association of a multispecies microbiota
Ren Dodge, Eric W. Jones, Haolong Zhu, Benjamin Obadia, Daniel J. Martinez, Chenhui Wang, Andrés Aranda-Díaz, Kevin Aumiller, Zhexian Liu, Marco Voltolini, Eoin L. Brodie, Kerwyn Casey Huang, Jean M. Carlson, David A. Sivak, Allan C. Spradling, William B. Ludington
bioRxiv 2021.09.30.462663
|
2021 |
High dimensional geometry of fitness landscapes identifies master regulators of evolution and the microbiome
Holger Eble, Michael Joswig, Lisa Lamberti, William B. Ludington
bioRxiv 2021.09.11.459926
|
2021 |
Stochastic microbiome assembly depends on context
Eric W. Jones, Jean M. Carlson, David A. Sivak, William B. Ludington
bioRxiv 2021.08.29.458111
|
2021 |
A chemically-defined growth medium to support Lactobacillus-Acetobacter community analysis
K Aumiller, E Stevens, R Scheffler, ZT Guvener, E Tung, AB Grimaldo, ...
bioRxiv 2021.05.12.443930
|
2021 |
Higher-order interactions in fitness landscapes are sparse
H Eble, M Joswig, L Lamberti, W Ludington
arXiv preprint arXiv:2009.12277
|
2020 |
Drosophila as a model for the gut microbiome
WB Ludington, WW Ja
PLoS Pathogens 16 (4), e1008398
|
2020 |
Testing the role of intraflagellar transport in flagellar length control using length-altering mutants of Chlamydomonas
K Wemmer, W Ludington, WF Marshall
Philosophical Transactions of the Royal Society B 375 (1792), 20190159
|
2020 |
Bacterial interspecies interactions modulate pH-mediated antibiotic tolerance
A Aranda-Díaz, B Obadia, R Dodge, T Thomsen, ZF Hallberg, ZT Güvener, ...
Elife 9, e51493
|
2020 |
Bellymount enables longitudinal, intravital imaging of abdominal organs and the gut microbiota in adult Drosophila
LAJ Koyama, A Aranda-Díaz, YH Su, S Balachandra, JL Martin, ...
PLoS biology 18 (1), e3000567
|
2020 |
Cluster partitions and fitness landscapes of the Drosophila fly microbiome
H Eble, M Joswig, L Lamberti, WB Ludington
Journal of mathematical biology 79 (3), 861-899
|
2019 |
Combinatorial ecology in the simple fruit fly gut microbiome
A Gould, V Zhang, L Lamberti, E Jones, B Obadia, N Korasidis, ...
APS Meeting Abstracts
|
2019 |
Microbiome interactions shape host fitness
AL Gould, V Zhang, L Lamberti, EW Jones, B Obadia, N Korasidis, ...
Proceedings of the National Academy of Sciences 115 (51), E11951-E11960
|
2018 |
Microbial quantity impacts Drosophila nutrition, development, and lifespan
ES Keebaugh, R Yamada, B Obadia, WB Ludington, WJ William
Iscience 4, 247-259
|
2018 |
Diet influences host–microbiota associations in Drosophila
B Obadia, ES Keebaugh, R Yamada, WB Ludington, WJ William
Proceedings of the National Academy of Sciences 115 (20), E4547-E4548
|
2018 |
Chronic ethanol ingestion impairs Drosophila melanogaster health in a microbiome-dependent manner
JA Chandler, LV Innocent, IL Huang, JL Yang, MB Eisen, WB Ludington
BioRxiv, 217240
|
2018 |
Probabilistic invasion underlies natural gut microbiome stability
B Obadia, ZT Güvener, V Zhang, JA Ceja-Navarro, EL Brodie, WW Ja, ...
Current Biology 27 (13), 1999-2006. e8
|
2017 |
MICROBIALLY-MEDIATED ALCOHOL RESISTANCE: A MODEL SYSTEM USING FRUIT FLIES, THEIRMICROBIOTA, AND INGESTED ALCOHOL
JA Chandler, D Rosenthal, A Jain, M Eisen, W Ludington
ALCOHOLISM-CLINICAL AND EXPERIMENTAL RESEARCH 41, 304A-304A
|
2017 |
Assessing biosynthetic potential of agricultural groundwater through metagenomic sequencing: A diverse anammox community dominates nitrate-rich groundwater
WB Ludington, TD Seher, O Applegate, X Li, JI Kliegman, C Langelier, ...
PloS one 12 (4)
|
2017 |
Maternal IgG and IgA antibodies dampen mucosal T helper cell responses in early life
MA Koch, GL Reiner, KA Lugo, LSM Kreuk, AG Stanbery, E Ansaldo, ...
Cell 165 (4), 827-841
|
2016 |
Stable host gene expression in the gut of adult Drosophila melanogaster with different bacterial mono-associations
C Elya, V Zhang, WB Ludington, MB Eisen
PloS one 11 (11)
|
2016 |
Invasion Dynamics in the Fly Gut Microbiota.
B Obadia, T Guvener, V Zhang, WB Ludington
MOLECULAR BIOLOGY OF THE CELL 27
|
2016 |
A systematic comparison of mathematical models for inherent measurement of ciliary length: how a cell can measure length and volume
WB Ludington, H Ishikawa, YV Serebrenik, A Ritter, RA Hernandez-Lopez, ...
Biophysical journal 108 (6), 1361-1379
|
2015 |
Avalanche-like behavior in ciliary import
WB Ludington, KA Wemmer, KF Lechtreck, GB Witman, WF Marshall
Proceedings of the National Academy of Sciences 110 (10), 3925-3930
|
2013 |
Organelle size equalization by a constitutive process
WB Ludington, LZ Shi, Q Zhu, MW Berns, WF Marshall
Current Biology 22 (22), 2173-2179
|
2012 |
Flagellar length control in Chlamydomonas reinhardtii, experimental and mathematical approaches
WB Ludington
UCSF
|
2011 |