Publications

Identification of compounds that decrease the fidelity of start codon recognition by the eukaryotic translational machinery. Takacs JE, Neary TB, Ingolia NT, Saini AK, Martin-Marcos P, Pelletier J, Hinnebusch AG, Lorsch JR. RNA. 2011 Mar;17(3):439-52. Epub 2011 Jan 10.

Genome-wide translational profiling by ribosome footprinting. Ingolia NT. Methods Enzymol. 2010;470:119-42. Epub 2010 Mar 1.

Mammalian microRNAs predominantly act to decrease target mRNA levels. Guo H, Ingolia NT, Weissman JS, Bartel DP. Nature. 2010 Aug 12;466(7308):835-40.

Molecular basis of infrared detection by snakes. Gracheva EO, Ingolia NT, Kelly YM, Cordero-Morales JF, Hollopeter G, Chesler AT, Sánchez EE, Perez JC, Weissman JS, Julius D. Nature. 2010 Apr 15;464(7291):1006-11. Epub 2010 Mar 14.

Rapid creation and quantitative monitoring of high coverage shRNA libraries. Bassik MC, Lebbink RJ, Churchman LS, Ingolia NT, Patena W, LeProust EM, Schuldiner M, Weissman JS, McManus MT. Nat Methods. 2009 Jun;6(6):443-5. Epub 2009 May 17.

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Ingolia NT, Ghaemmaghami S, Newman JR, Weissman JS. Science. 2009 Apr 10;324(5924):218-23. Epub 2009 Feb 12.

Systems biology: Reverse engineering the cell. Ingolia NT, Weissman JS. Nature. 2008 Aug 28;454(7208):1059-62.No abstract available.

Positive-feedback loops as a flexible biological module. Ingolia NT, Murray AW. Curr Biol. 2007 Apr 17;17(8):668-77. Epub 2007 Mar 29.

The ups and downs of modeling the cell cycle. Ingolia NT, Murray AW. Curr Biol. 2004 Sep 21;14(18):R771-7. Review.

Topology and robustness in the Drosophila segment polarity network. Ingolia NT. PLoS Biol. 2004 Jun;2(6):e123. Epub 2004 Jun 15.

Signal transduction. History matters. Ingolia NT, Murray AW. Science. 2002 Aug 9;297(5583):948-9. No abstract available.